Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV26-1A0A087WT03 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 AC087633.2-202ENST00000565166 1439 ntBASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV26-1A0A087WT03 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 KRT18P68-201ENST00000392293 1000 ntBASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 MIPEPP3-201ENST00000412105 444 ntBASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 GUSBP6-202ENST00000438529 1198 ntBASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 AL589743.5-201ENST00000616611 1050 ntBASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TRAV26-1A0A087WT03 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 AC020916.1-201ENST00000587762 1774 ntBASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV26-1A0A087WT03 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV26-1A0A087WT03 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms