Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 AC107398.3-201ENST00000562284 7000 ntBASIC6.24□□□□□ -1.41
CHD8Q9HCK8 ZNF383-208ENST00000590503 1673 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 AC005538.2-201ENST00000623215 1864 ntBASIC6.24□□□□□ -1.41
CHD8Q9HCK8 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 ADGRG6-203ENST00000367608 6879 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CHD8Q9HCK8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 FTH1P25-201ENST00000447665 469 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 RHEBP1-201ENST00000448647 556 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 YWHAEP1-201ENST00000453697 763 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 OR4A42P-201ENST00000531397 938 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 COX6CP7-201ENST00000597056 208 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC068768.2-201ENST00000602352 343 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AL035410.2-201ENST00000604963 864 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AL035563.1-201ENST00000609087 1539 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 SNORA11F-201ENST00000408237 128 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC011476.1-201ENST00000466725 307 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC134698.5-201ENST00000519444 336 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 TSHZ2-205ENST00000626626 670 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AC116667.2-201ENST00000641075 823 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 MAPK10-281ENST00000641170 3070 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 AKAP12-202ENST00000354675 6287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 RORB-202ENST00000396204 2996 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 NLRP9P1-201ENST00000540920 2655 ntBASIC6.23□□□□□ -1.41
CHD8Q9HCK8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CHD8Q9HCK8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 TNFSF15-201ENST00000374044 2789 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 LINC00423-201ENST00000421002 903 ntTSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 RPS27AP6-201ENST00000427962 448 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AL954705.1-201ENST00000435277 559 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 RPL5P14-201ENST00000494197 878 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AC120036.3-201ENST00000517826 292 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 MIR1269B-201ENST00000580405 75 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AC073333.2-201ENST00000603589 769 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AP001784.1-201ENST00000624107 428 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AC100871.1-201ENST00000507871 1456 ntBASIC6.22□□□□□ -1.41
CHD8Q9HCK8 DOCK8-205ENST00000453981 7237 ntTSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 UGT2B7-205ENST00000622664 1532 ntTSL 5 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CHD8Q9HCK8 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms