Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GTF2IP1-202ENST00000614592 2047 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ZNF192P2-201ENST00000402215 1383 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 BMS1P3-201ENST00000372011 932 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PPCS-204ENST00000372562 966 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 RN7SKP89-201ENST00000410774 242 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL390023.1-201ENST00000428836 262 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 EEF1A1P27-201ENST00000429983 1135 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC007790.1-201ENST00000439081 782 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 Z99127.2-201ENST00000441426 334 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC073387.1-201ENST00000453261 709 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC234771.3-201ENST00000454984 622 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 TRBV8-1-201ENST00000481590 279 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC107956.2-201ENST00000496042 454 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC093821.1-201ENST00000503950 539 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC134698.4-201ENST00000523451 826 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 DCN-207ENST00000546370 586 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC025283.1-201ENST00000572039 734 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC073387.2-201ENST00000604797 784 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC004852.1-201ENST00000605206 154 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 U47924.1-201ENST00000606539 434 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 U91328.4-201ENST00000608919 517 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC092106.3-201ENST00000611308 722 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL669830.1-201ENST00000621457 656 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC005383.1-201ENST00000622689 534 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC016582.3-206ENST00000636547 207 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 DYNC2LI1-203ENST00000398823 2903 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 CCNC-204ENST00000482541 1704 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 CNPY1-204ENST00000636446 1637 ntAPPRIS P5 TSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 AC097634.1-201ENST00000604491 2467 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 CASC19-205ENST00000641013 1411 ntBASIC7.01□□□□□ -1.29
NUP43Q8NFH3 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.01□□□□□ -1.29
NUP43Q8NFH3 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7□□□□□ -1.29
NUP43Q8NFH3 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 CASC19-255ENST00000641733 1385 ntBASIC7□□□□□ -1.29
NUP43Q8NFH3 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 RNA5SP483-201ENST00000363431 118 ntBASIC7□□□□□ -1.29
NUP43Q8NFH3 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NUP43Q8NFH3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC7□□□□□ -1.29
NUP43Q8NFH3 SNORA2C-201ENST00000408564 137 ntBASIC7□□□□□ -1.29
NUP43Q8NFH3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC7□□□□□ -1.29
NUP43Q8NFH3 HMGB1P49-201ENST00000418882 569 ntBASIC7□□□□□ -1.29
NUP43Q8NFH3 EEF1A1P34-201ENST00000419888 1267 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms