Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL139184.1-202ENST00000422303 222 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 GPN3P1-201ENST00000423883 535 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AL645939.3-201ENST00000435408 225 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AL139156.3-201ENST00000454802 394 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC022415.1-202ENST00000486612 523 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 HMGN1P16-201ENST00000508308 283 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 IGLV3-6-201ENST00000523937 250 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AL589743.6-201ENST00000611025 117 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 AC011455.2-201ENST00000599320 3336 ntBASIC10.31□□□□□ -0.76
VPS8Q8N3P4 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS8Q8N3P4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC009120.2-204ENST00000621548 2032 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AKR1B10P1-201ENST00000425765 942 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC234771.2-201ENST00000445718 597 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC013731.1-201ENST00000604340 883 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC011891.2-201ENST00000604949 397 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC025171.4-201ENST00000607250 1047 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AL359091.2-201ENST00000609303 556 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 MIR6780B-201ENST00000610307 79 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC012676.3-201ENST00000614983 479 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AL596275.2-207ENST00000641188 675 ntBASIC10.3□□□□□ -0.76
VPS8Q8N3P4 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS8Q8N3P4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 CASC19-228ENST00000641414 1684 ntBASIC10.29□□□□□ -0.76
VPS8Q8N3P4 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 AL023284.3-201ENST00000407767 334 ntBASIC10.29□□□□□ -0.76
VPS8Q8N3P4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 RN7SL208P-201ENST00000577964 296 ntBASIC10.29□□□□□ -0.76
VPS8Q8N3P4 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 AC012368.3-201ENST00000604190 219 ntBASIC10.29□□□□□ -0.76
VPS8Q8N3P4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 MROH3P-201ENST00000435735 2676 ntBASIC10.29□□□□□ -0.76
VPS8Q8N3P4 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS8Q8N3P4 HLF-210ENST00000575345 3589 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 LARS-212ENST00000510191 3737 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS8Q8N3P4 RNU1-46P-201ENST00000384425 164 ntBASIC10.28□□□□□ -0.76
VPS8Q8N3P4 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms