Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AL359092.1-201ENST00000417156 265 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AC097463.1-201ENST00000447288 481 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 HMGB1P7-201ENST00000450921 612 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 RPL7P51-201ENST00000490532 749 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AL589863.1-201ENST00000595383 631 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 RPSAP75-201ENST00000605848 301 ntBASIC8.11□□□□□ -1.11
SNED1Q8TER0 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
SNED1Q8TER0 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
SNED1Q8TER0 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 TRIM60-204ENST00000512596 1888 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNED1Q8TER0 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 AC007406.5-201ENST00000570140 3170 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 AL590065.1-201ENST00000603371 4774 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
SNED1Q8TER0 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNED1Q8TER0 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 NRIR-201ENST00000366140 799 ntTSL 3 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNED1Q8TER0 AL157702.1-201ENST00000398764 426 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 RN7SKP206-201ENST00000410823 293 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 RPS7P12-201ENST00000422385 582 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 AC073109.1-201ENST00000445066 978 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 RBMY3AP-201ENST00000449381 1145 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 RPS14P8-201ENST00000478778 369 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 AC026124.2-201ENST00000621847 656 ntBASIC8.1□□□□□ -1.11
SNED1Q8TER0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
SNED1Q8TER0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC8.1□□□□□ -1.11
SNED1Q8TER0 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AC004386.1-201ENST00000393214 761 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 MTND2P12-201ENST00000417560 1252 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 HLA-DPA3-207ENST00000454398 229 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 AC068228.1-201ENST00000461723 211 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 RNA5SP418-201ENST00000515951 117 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 RN7SL475P-201ENST00000583379 298 ntBASIC8.09□□□□□ -1.11
SNED1Q8TER0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC8.09□□□□□ -1.11
SNED1Q8TER0 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
SNED1Q8TER0 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
SNED1Q8TER0 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms