Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 AC009831.5-201ENST00000624000 3189 ntBASIC7.56□□□□□ -1.2
TPM3P06753 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 AC020658.2-201ENST00000559030 4020 ntBASIC7.56□□□□□ -1.2
TPM3P06753 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TPM3P06753 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
TPM3P06753 AL139415.1-201ENST00000424862 352 ntBASIC7.56□□□□□ -1.2
TPM3P06753 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 AC245452.2-201ENST00000435222 392 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 RPS26P11-201ENST00000463445 348 ntBASIC7.56□□□□□ -1.2
TPM3P06753 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.56□□□□□ -1.2
TPM3P06753 RN7SL165P-201ENST00000477476 291 ntBASIC7.56□□□□□ -1.2
TPM3P06753 RN7SL338P-201ENST00000481467 293 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.56□□□□□ -1.2
TPM3P06753 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 NXPE2P1-201ENST00000543705 726 ntBASIC7.56□□□□□ -1.2
TPM3P06753 OR4F28P-201ENST00000559128 938 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 MIR3159-201ENST00000584572 74 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 OR4F8P-201ENST00000589943 937 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AP000436.1-201ENST00000605239 800 ntBASIC7.56□□□□□ -1.2
TPM3P06753 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 FAM74A6-203ENST00000615956 481 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AL669830.1-201ENST00000621457 656 ntBASIC7.56□□□□□ -1.2
TPM3P06753 AC016542.3-201ENST00000623520 619 ntBASIC7.56□□□□□ -1.2
TPM3P06753 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
TPM3P06753 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
TPM3P06753 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.56□□□□□ -1.2
TPM3P06753 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.56□□□□□ -1.2
TPM3P06753 AC006213.6-201ENST00000623722 4179 ntBASIC7.56□□□□□ -1.2
TPM3P06753 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 AC130360.2-201ENST00000533477 1556 ntBASIC7.55□□□□□ -1.2
TPM3P06753 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
TPM3P06753 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.55□□□□□ -1.2
TPM3P06753 HMGB1P39-201ENST00000366304 880 ntBASIC7.55□□□□□ -1.2
TPM3P06753 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 LCN1P2-201ENST00000372030 223 ntBASIC7.55□□□□□ -1.2
TPM3P06753 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 RPL7-203ENST00000396466 762 ntTSL 3 BASIC7.55□□□□□ -1.2
TPM3P06753 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 HBG2-204ENST00000444587 307 ntTSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.55□□□□□ -1.2
TPM3P06753 MGAT2P1-201ENST00000449718 797 ntBASIC7.55□□□□□ -1.2
TPM3P06753 AC010878.1-201ENST00000456500 1047 ntBASIC7.55□□□□□ -1.2
TPM3P06753 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.55□□□□□ -1.2
TPM3P06753 WBP1LP1-201ENST00000460451 896 ntBASIC7.55□□□□□ -1.2
TPM3P06753 MRPL49P1-201ENST00000505951 535 ntBASIC7.55□□□□□ -1.2
TPM3P06753 IGHV3-57-201ENST00000520143 280 ntBASIC7.55□□□□□ -1.2
TPM3P06753 AP005639.1-201ENST00000526939 192 ntBASIC7.55□□□□□ -1.2
TPM3P06753 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.55□□□□□ -1.2
TPM3P06753 AC093524.1-201ENST00000564266 1094 ntBASIC7.55□□□□□ -1.2
TPM3P06753 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 AC012653.2-201ENST00000621880 420 ntBASIC7.55□□□□□ -1.2
TPM3P06753 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.55□□□□□ -1.2
TPM3P06753 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
TPM3P06753 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
TPM3P06753 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
TPM3P06753 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.54□□□□□ -1.2
TPM3P06753 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
TPM3P06753 DNM1P47-203ENST00000571780 12667 ntBASIC7.54□□□□□ -1.2
TPM3P06753 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms