Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL023284.4-201ENST00000564248 374 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 VN1R65P-201ENST00000566443 808 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AL391840.1-201ENST00000571144 367 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC105243.1-202ENST00000583942 847 ntTSL 3 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC093458.1-201ENST00000608912 222 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC116165.3-201ENST00000614524 400 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC109454.4-201ENST00000623411 649 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC009033.1-201ENST00000624279 431 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 UACA-203ENST00000539319 4026 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC130456.1-201ENST00000565085 1363 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 CFAP58-202ENST00000369704 3313 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AL359715.4-201ENST00000606629 1436 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 MAPK10-255ENST00000641020 2412 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 LYZ-201ENST00000261267 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC008817.1-201ENST00000504215 1562 ntBASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 HKR1-202ENST00000392153 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 TRIM43-201ENST00000272395 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.94□□□□□ -0.98
SCUBE3Q8IX30 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 CLDN8-201ENST00000399899 2068 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 LINC01616-201ENST00000561816 2280 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC091132.4-201ENST00000587960 2262 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 LINC01856-201ENST00000450840 2398 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 GLDCP1-201ENST00000510885 2678 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ZSCAN32-201ENST00000304926 3027 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 OR2T4-202ENST00000366475 1047 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 SUGT1P2-201ENST00000379452 992 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 RNU6-1227P-201ENST00000383981 107 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 RNU6-253P-201ENST00000384730 105 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ANXA2P3-201ENST00000404883 1008 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 BMP2KL-201ENST00000414251 1225 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC008850.1-201ENST00000427546 362 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL441963.1-201ENST00000435137 792 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 OR51R1P-201ENST00000435309 952 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 DPPA3P1-201ENST00000448050 469 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 RBM43P1-201ENST00000476891 1081 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AK4P6-201ENST00000505168 528 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL445383.1-201ENST00000554689 874 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AC008277.2-201ENST00000605196 797 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 GPC6-202ENST00000617456 792 ntTSL 3 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 MIR6829-201ENST00000620375 67 ntBASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
SCUBE3Q8IX30 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms