Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC099782.1-201ENST00000425889 474 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC018804.1-201ENST00000430381 618 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 RN7SL180P-201ENST00000466769 294 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 NDUFA5P5-201ENST00000468361 342 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC096708.2-201ENST00000577676 512 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AL138895.2-201ENST00000603019 178 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 DIMT1P1-201ENST00000603970 763 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AL121809.2-201ENST00000613169 341 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC027559.1-201ENST00000636288 271 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC005839.1-201ENST00000624148 3213 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 OR52K3P-202ENST00000641797 1729 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 CDKL5-202ENST00000379996 3449 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AC010886.1-201ENST00000437380 2869 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 AL353807.3-201ENST00000500626 2505 ntBASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RP1L1Q8IWN7 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 BRD7P1-201ENST00000557705 1915 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 RNA5SP152-201ENST00000365184 110 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AL451046.1-201ENST00000406097 534 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC093870.1-201ENST00000506837 213 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC079905.1-201ENST00000549280 475 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC026458.1-201ENST00000564330 438 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 DUSP22-216ENST00000605863 551 ntTSL 4 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SNX18P12-201ENST00000624821 759 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC130365.1-201ENST00000530524 1553 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LCN1P2-201ENST00000372030 223 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 CLUHP1-201ENST00000435012 1190 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LINC00533-201ENST00000456103 537 ntTSL 3 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 RN7SKP198-201ENST00000459286 306 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC104339.1-201ENST00000465478 348 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 NXPE2P1-201ENST00000543705 726 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AL365181.4-201ENST00000609800 547 ntBASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 AL929601.3-201ENST00000613990 2086 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
RP1L1Q8IWN7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms