RNA–Protein interactions for RNA: ENST00000369787.7

KCNC4-201, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNC4, Length 18,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-201ENST00000369787 DCAF8L2P0C7V8 631 aa9.76□□□□□ -0.85
KCNC4-201ENST00000369787 PELP1Q8IZL8 1130 aaKnown RBP9.01□□□□□ -0.97
KCNC4-201ENST00000369787 FAM9AQ8IZU1 332 aaPredicted RBP9.01□□□□□ -0.97
KCNC4-201ENST00000369787 SUPT5HO00267 1087 aaKnown RBP8.95□□□□□ -0.98
KCNC4-201ENST00000369787 APLP2Q06481 763 aa8.9□□□□□ -0.98
KCNC4-201ENST00000369787 EHMT2Q96KQ7 1210 aa8.81□□□□□ -1
KCNC4-201ENST00000369787 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
KCNC4-201ENST00000369787 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
KCNC4-201ENST00000369787 ATP1B4Q9UN42 357 aaPredicted RBP8.59□□□□□ -1.03
KCNC4-201ENST00000369787 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
KCNC4-201ENST00000369787 PCGF6Q9BYE7 350 aa8.49□□□□□ -1.05
KCNC4-201ENST00000369787 TTBK1Q5TCY1 1321 aaPredicted RBP8.49□□□□□ -1.05
KCNC4-201ENST00000369787 RANGAP1P46060 587 aaPredicted RBP8.48□□□□□ -1.05
KCNC4-201ENST00000369787 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
KCNC4-201ENST00000369787 NEFLP07196 543 aa8.39□□□□□ -1.07
KCNC4-201ENST00000369787 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
KCNC4-201ENST00000369787 ZEB1P37275 1124 aaPredicted RBP8.38□□□□□ -1.07
KCNC4-201ENST00000369787 MYT1LQ9UL68 1186 aa8.37□□□□□ -1.07
KCNC4-201ENST00000369787 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.08
KCNC4-201ENST00000369787 TRIM41Q8WV44 630 aa8.32□□□□□ -1.08
KCNC4-201ENST00000369787 NISCHQ9Y2I1 1504 aa8.28□□□□□ -1.08
KCNC4-201ENST00000369787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.24□□□□□ -1.09
KCNC4-201ENST00000369787 HNRNPUL2Q1KMD3 747 aaKnown RBP8.24□□□□□ -1.09
KCNC4-201ENST00000369787 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
KCNC4-201ENST00000369787 CHIC1Q5VXU3 224 aa8.21□□□□□ -1.1
KCNC4-201ENST00000369787 YTHDC1Q96MU7 727 aaKnown RBP8.19□□□□□ -1.1
KCNC4-201ENST00000369787 SLC4A1APQ9BWU0 796 aaKnown RBP8.19□□□□□ -1.1
KCNC4-201ENST00000369787 MYT1Q01538 1121 aa8.16□□□□□ -1.1
KCNC4-201ENST00000369787 ITGAEP38570 1179 aa8.1□□□□□ -1.11
KCNC4-201ENST00000369787 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
KCNC4-201ENST00000369787 PPARGC1BQ86YN6 1023 aaKnown RBP8.07□□□□□ -1.12
KCNC4-201ENST00000369787 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
KCNC4-201ENST00000369787 ZBTB47Q9UFB7 747 aaPredicted RBP8.04□□□□□ -1.12
KCNC4-201ENST00000369787 ZNF316A6NFI3 1004 aaPredicted RBP8.03□□□□□ -1.12
KCNC4-201ENST00000369787 TRIM26Q12899 539 aaPredicted RBP7.99□□□□□ -1.13
KCNC4-201ENST00000369787 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
KCNC4-201ENST00000369787 BCANQ96GW7 911 aa7.97□□□□□ -1.13
KCNC4-201ENST00000369787 NEFMP07197 916 aa7.95□□□□□ -1.14
KCNC4-201ENST00000369787 RTL5Q5HYW3 569 aaPredicted RBP7.95□□□□□ -1.14
KCNC4-201ENST00000369787 TRIM52Q96A61 297 aa7.93□□□□□ -1.14
KCNC4-201ENST00000369787 FAM50AQ14320 339 aaKnown RBP7.9□□□□□ -1.15
KCNC4-201ENST00000369787 HRCP23327 699 aa7.87□□□□□ -1.15
KCNC4-201ENST00000369787 FBLN2P98095 1184 aa7.86□□□□□ -1.15
KCNC4-201ENST00000369787 NEUROD1Q13562 356 aa7.85□□□□□ -1.15
KCNC4-201ENST00000369787 BCL11AQ9H165 835 aa7.85□□□□□ -1.15
KCNC4-201ENST00000369787 ESF1Q9H501 851 aaKnown RBP7.84□□□□□ -1.15
KCNC4-201ENST00000369787 LOC105371045A0A1W2PR82 267 aa7.82□□□□□ -1.16
KCNC4-201ENST00000369787 ANP32CO43423 234 aa7.8□□□□□ -1.16
KCNC4-201ENST00000369787 CANXP27824 592 aaKnown RBP7.8□□□□□ -1.16
KCNC4-201ENST00000369787 ZNF326Q5BKZ1 582 aaKnown RBP7.79□□□□□ -1.16
KCNC4-201ENST00000369787 STAG3Q9UJ98 1225 aa7.78□□□□□ -1.16
KCNC4-201ENST00000369787 CDK11AQ9UQ88 783 aaPredicted RBP7.77□□□□□ -1.17
KCNC4-201ENST00000369787 DIEXFQ68CQ4 756 aaKnown RBP7.75□□□□□ -1.17
KCNC4-201ENST00000369787 ANP32BQ92688 251 aaKnown RBP7.73□□□□□ -1.17
KCNC4-201ENST00000369787 PABPN1Q86U42 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
KCNC4-201ENST00000369787 PLPPR3Q6T4P5 718 aa7.71□□□□□ -1.18
KCNC4-201ENST00000369787 HSP90AA1P07900 732 aaKnown RBP7.71□□□□□ -1.18
KCNC4-201ENST00000369787 NPM1P06748 294 aaKnown RBP eCLIP7.68□□□□□ -1.18
KCNC4-201ENST00000369787 CHGAP10645 457 aaKnown RBP7.66□□□□□ -1.18
KCNC4-201ENST00000369787 ZNF777Q9ULD5 760 aaPredicted RBP7.66□□□□□ -1.18
KCNC4-201ENST00000369787 CDK11BP21127 795 aaKnown RBP7.66□□□□□ -1.18
KCNC4-201ENST00000369787 ANP32AP39687 249 aaKnown RBP7.65□□□□□ -1.18
KCNC4-201ENST00000369787 NPM2Q86SE8 214 aaKnown RBP7.64□□□□□ -1.19
KCNC4-201ENST00000369787 ARID3CA6NKF2 412 aa7.63□□□□□ -1.19
KCNC4-201ENST00000369787 UPF2Q9HAU5 1272 aaKnown RBP7.63□□□□□ -1.19
KCNC4-201ENST00000369787 P3H3Q8IVL6 736 aa7.63□□□□□ -1.19
KCNC4-201ENST00000369787 A0A0G2JS52 829 aa7.6□□□□□ -1.19
KCNC4-201ENST00000369787 SCAF1Q9H7N4 1312 aaKnown RBP7.6□□□□□ -1.19
KCNC4-201ENST00000369787 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.58□□□□□ -1.2
KCNC4-201ENST00000369787 C14orf37Q86TY3 774 aa7.57□□□□□ -1.2
KCNC4-201ENST00000369787 TMC1Q8TDI8 760 aa7.55□□□□□ -1.2
KCNC4-201ENST00000369787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.55□□□□□ -1.2
KCNC4-201ENST00000369787 HAP1P54257 671 aaPredicted RBP7.53□□□□□ -1.2
KCNC4-201ENST00000369787 MYH16Q9H6N6 1097 aa7.52□□□□□ -1.21
KCNC4-201ENST00000369787 TSPY4P0CV99 314 aa7.51□□□□□ -1.21
KCNC4-201ENST00000369787 TSPY10P0CW01 314 aa7.51□□□□□ -1.21
KCNC4-201ENST00000369787 ARXQ96QS3 562 aa7.5□□□□□ -1.21
KCNC4-201ENST00000369787 SALL2Q9Y467 1007 aaPredicted RBP7.5□□□□□ -1.21
KCNC4-201ENST00000369787 GTF3C3Q9Y5Q9 886 aa7.5□□□□□ -1.21
KCNC4-201ENST00000369787 EIF5BO60841 1220 aaKnown RBP7.5□□□□□ -1.21
KCNC4-201ENST00000369787 NPHP1O15259 732 aa7.49□□□□□ -1.21
KCNC4-201ENST00000369787 PLEKHG5O94827 1062 aa7.48□□□□□ -1.21
KCNC4-201ENST00000369787 TULP1O00294 542 aaPredicted RBP7.48□□□□□ -1.21
KCNC4-201ENST00000369787 WDR43Q15061 677 aaKnown RBP eCLIP7.48□□□□□ -1.21
KCNC4-201ENST00000369787 KDM2AQ9Y2K7 1162 aa7.47□□□□□ -1.21
KCNC4-201ENST00000369787 CSRNP3Q8WYN3 585 aa7.47□□□□□ -1.21
KCNC4-201ENST00000369787 NCLP19338 710 aaKnown RBP7.47□□□□□ -1.21
KCNC4-201ENST00000369787 CCDC136Q96JN2 1154 aa7.47□□□□□ -1.21
KCNC4-201ENST00000369787 ZBTB7CA1YPR0 619 aa7.47□□□□□ -1.21
KCNC4-201ENST00000369787 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
KCNC4-201ENST00000369787 CHMP7Q8WUX9 453 aaPredicted RBP7.45□□□□□ -1.22
KCNC4-201ENST00000369787 PPP1R15AO75807 674 aaPredicted RBP7.45□□□□□ -1.22
KCNC4-201ENST00000369787 HNRNPUQ00839 825 aaKnown RBP eCLIP7.44□□□□□ -1.22
KCNC4-201ENST00000369787 GLIPR1L2Q4G1C9 344 aa7.44□□□□□ -1.22
KCNC4-201ENST00000369787 ANP32EQ9BTT0 268 aa7.44□□□□□ -1.22
KCNC4-201ENST00000369787 FAM9BQ8IZU0 186 aa7.44□□□□□ -1.22
KCNC4-201ENST00000369787 DDX10Q13206 875 aaKnown RBP7.43□□□□□ -1.22
KCNC4-201ENST00000369787 ABCC9O60706 1549 aa7.42□□□□□ -1.22
KCNC4-201ENST00000369787 ZRSR1Q15695 479 aaKnown RBP7.42□□□□□ -1.22
KCNC4-201ENST00000369787 CASC1Q6TDU7 716 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 265.3 ms