Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 IGLV3-6-201ENST00000523937 250 ntBASIC5.83□□□□□ -1.48
CCL1P22362 KCTD9P4-201ENST00000526766 1166 ntBASIC5.83□□□□□ -1.48
CCL1P22362 AP001646.2-201ENST00000528645 1156 ntBASIC5.83□□□□□ -1.48
CCL1P22362 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL1P22362 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC5.83□□□□□ -1.48
CCL1P22362 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL1P22362 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.83□□□□□ -1.48
CCL1P22362 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL1P22362 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL1P22362 AC024451.4-201ENST00000602578 752 ntBASIC5.83□□□□□ -1.48
CCL1P22362 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.83□□□□□ -1.48
CCL1P22362 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL1P22362 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 ZNF840P-201ENST00000504759 1996 ntBASIC5.83□□□□□ -1.48
CCL1P22362 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL1P22362 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CCL1P22362 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 Z93929.1-201ENST00000418200 1475 ntBASIC5.83□□□□□ -1.48
CCL1P22362 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 AC241584.2-201ENST00000637142 2090 ntBASIC5.83□□□□□ -1.48
CCL1P22362 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.83□□□□□ -1.48
CCL1P22362 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CCL1P22362 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL1P22362 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCL1P22362 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 ZNF812P-201ENST00000457674 1694 ntBASIC5.82□□□□□ -1.48
CCL1P22362 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 STAG3L4-201ENST00000352103 530 ntBASIC5.82□□□□□ -1.48
CCL1P22362 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL1P22362 AL353626.3-201ENST00000413399 657 ntBASIC5.82□□□□□ -1.48
CCL1P22362 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL1P22362 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 AC009518.3-201ENST00000438972 253 ntBASIC5.82□□□□□ -1.48
CCL1P22362 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL1P22362 RPL23AP28-201ENST00000448062 470 ntBASIC5.82□□□□□ -1.48
CCL1P22362 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCL1P22362 AC097460.2-201ENST00000511857 741 ntBASIC5.82□□□□□ -1.48
CCL1P22362 AC026774.2-201ENST00000513990 1098 ntBASIC5.82□□□□□ -1.48
CCL1P22362 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL1P22362 RNA5SP318-201ENST00000516352 92 ntBASIC5.82□□□□□ -1.48
CCL1P22362 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.82□□□□□ -1.48
CCL1P22362 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CCL1P22362 AP006587.6-201ENST00000582128 1091 ntBASIC5.82□□□□□ -1.48
CCL1P22362 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL1P22362 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.82□□□□□ -1.48
CCL1P22362 AC012629.3-201ENST00000623397 328 ntBASIC5.82□□□□□ -1.48
CCL1P22362 AC073857.1-201ENST00000625082 1054 ntBASIC5.82□□□□□ -1.48
CCL1P22362 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
CCL1P22362 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.82□□□□□ -1.48
CCL1P22362 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 AC016251.2-201ENST00000623393 3089 ntBASIC5.82□□□□□ -1.48
CCL1P22362 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.82□□□□□ -1.48
CCL1P22362 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CCL1P22362 AL137918.1-201ENST00000624542 1922 ntBASIC5.82□□□□□ -1.48
CCL1P22362 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 SELE-203ENST00000367775 3389 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CCL1P22362 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 AC022613.3-201ENST00000560740 1346 ntBASIC5.81□□□□□ -1.48
CCL1P22362 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.81□□□□□ -1.48
CCL1P22362 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CCL1P22362 Y_RNA.209-201ENST00000364156 111 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.81□□□□□ -1.48
CCL1P22362 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC5.81□□□□□ -1.48
CCL1P22362 PAICSP2-201ENST00000429118 1150 ntBASIC5.81□□□□□ -1.48
CCL1P22362 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.81□□□□□ -1.48
CCL1P22362 OSTCP2-201ENST00000437956 444 ntBASIC5.81□□□□□ -1.48
CCL1P22362 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms