Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
FOXG1P55316 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXG1P55316 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXG1P55316 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.12□□□□□ -1.43
FOXG1P55316 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXG1P55316 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXG1P55316 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXG1P55316 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXG1P55316 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXG1P55316 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXG1P55316 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXG1P55316 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXG1P55316 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
FOXG1P55316 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXG1P55316 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXG1P55316 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
FOXG1P55316 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.12□□□□□ -1.43
FOXG1P55316 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXG1P55316 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 DYNC1I2P1-201ENST00000435916 1838 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 DDX43P1-201ENST00000510713 1763 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC102941.1-201ENST00000567616 1537 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AL359922.2-201ENST00000581788 3017 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXG1P55316 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 RN7SKP62-201ENST00000384539 329 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 CYP4F32P-201ENST00000426492 504 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC083855.1-201ENST00000440041 258 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 RPL7AP71-201ENST00000451120 739 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AL034399.1-201ENST00000451535 380 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 MTND2P3-201ENST00000452458 470 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AL096803.1-201ENST00000456921 1021 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 RPS4XP23-201ENST00000487801 237 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 AP002004.1-206ENST00000532441 876 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AC007537.1-201ENST00000539347 327 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 PPIAP6-201ENST00000557078 499 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXG1P55316 RPS27AP19-201ENST00000597285 458 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AC018754.1-201ENST00000607486 925 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 AC091059.2-201ENST00000623355 614 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 AC005355.2-201ENST00000625064 484 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXG1P55316 AL596275.2-203ENST00000641951 371 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXG1P55316 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 AL031123.3-201ENST00000623345 1837 ntBASIC6.11□□□□□ -1.43
FOXG1P55316 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
FOXG1P55316 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXG1P55316 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 AC129502.1-201ENST00000623261 1654 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXG1P55316 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 MARK2P4-201ENST00000503381 2380 ntBASIC6.1□□□□□ -1.43
FOXG1P55316 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXG1P55316 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms