RNA–Protein interactions for RNA: ENST00000556684.5

LINC01146-206, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 361 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-206ENST00000556684 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
LINC01146-206ENST00000556684 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
LINC01146-206ENST00000556684 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
LINC01146-206ENST00000556684 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
LINC01146-206ENST00000556684 FOXD1Q16676 465 aa22.3■■□□□ 1.16
LINC01146-206ENST00000556684 PLPPR3Q6T4P5 718 aa21.36■■□□□ 1.01
LINC01146-206ENST00000556684 PPP6R1Q9UPN7 881 aa20.9■□□□□ 0.94
LINC01146-206ENST00000556684 PIAS4Q8N2W9 510 aaPredicted RBP20.88■□□□□ 0.93
LINC01146-206ENST00000556684 ADRA2BP18089 450 aa20.85■□□□□ 0.93
LINC01146-206ENST00000556684 MSH5O43196 834 aa20.84■□□□□ 0.93
LINC01146-206ENST00000556684 POTEDQ86YR6 584 aa20.26■□□□□ 0.83
LINC01146-206ENST00000556684 MAPK8IP2Q13387 824 aaPredicted RBP19.13■□□□□ 0.65
LINC01146-206ENST00000556684 SCAF1Q9H7N4 1312 aaKnown RBP19.03■□□□□ 0.64
LINC01146-206ENST00000556684 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
LINC01146-206ENST00000556684 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
LINC01146-206ENST00000556684 CNKSR2Q8WXI2 1034 aa18.36■□□□□ 0.53
LINC01146-206ENST00000556684 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
LINC01146-206ENST00000556684 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
LINC01146-206ENST00000556684 RNF216Q9NWF9 866 aaPredicted RBP18.17■□□□□ 0.5
LINC01146-206ENST00000556684 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
LINC01146-206ENST00000556684 CACNB1Q02641 598 aaPredicted RBP17.87■□□□□ 0.45
LINC01146-206ENST00000556684 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
LINC01146-206ENST00000556684 RNF39Q9H2S5 420 aa17.79■□□□□ 0.44
LINC01146-206ENST00000556684 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.44
LINC01146-206ENST00000556684 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
LINC01146-206ENST00000556684 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
LINC01146-206ENST00000556684 KCNA4P22459 653 aa17.5■□□□□ 0.39
LINC01146-206ENST00000556684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC01146-206ENST00000556684 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
LINC01146-206ENST00000556684 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
LINC01146-206ENST00000556684 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
LINC01146-206ENST00000556684 CAPN15O75808 1086 aa16.83■□□□□ 0.28
LINC01146-206ENST00000556684 DSG3P32926 999 aa16.69■□□□□ 0.26
LINC01146-206ENST00000556684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.61■□□□□ 0.25
LINC01146-206ENST00000556684 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
LINC01146-206ENST00000556684 APLP2Q06481 763 aa16.6■□□□□ 0.25
LINC01146-206ENST00000556684 TRHP20396 242 aaPredicted RBP16.58■□□□□ 0.24
LINC01146-206ENST00000556684 SLC4A1APQ9BWU0 796 aaKnown RBP16.53■□□□□ 0.24
LINC01146-206ENST00000556684 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.24
LINC01146-206ENST00000556684 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
LINC01146-206ENST00000556684 ABCB7O75027 752 aa16.46■□□□□ 0.23
LINC01146-206ENST00000556684 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
LINC01146-206ENST00000556684 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
LINC01146-206ENST00000556684 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
LINC01146-206ENST00000556684 POLA2Q14181 598 aa16.12■□□□□ 0.17
LINC01146-206ENST00000556684 ZBTB22O15209 634 aa16.09■□□□□ 0.17
LINC01146-206ENST00000556684 ATF5Q9Y2D1 282 aaPredicted RBP16.07■□□□□ 0.16
LINC01146-206ENST00000556684 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
LINC01146-206ENST00000556684 POTEHQ6S545 545 aa15.9■□□□□ 0.14
LINC01146-206ENST00000556684 ABCC9O60706 1549 aa15.82■□□□□ 0.12
LINC01146-206ENST00000556684 ZBTB12Q9Y330 459 aaPredicted RBP15.77■□□□□ 0.12
LINC01146-206ENST00000556684 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
LINC01146-206ENST00000556684 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
LINC01146-206ENST00000556684 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
LINC01146-206ENST00000556684 AKT1S1Q96B36 256 aa15.55■□□□□ 0.08
LINC01146-206ENST00000556684 FBLN2P98095 1184 aa15.44■□□□□ 0.06
LINC01146-206ENST00000556684 REM2Q8IYK8 340 aaPredicted RBP15.42■□□□□ 0.06
LINC01146-206ENST00000556684 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
LINC01146-206ENST00000556684 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
LINC01146-206ENST00000556684 SPDYE2BA6NHP3 402 aa15.29■□□□□ 0.04
LINC01146-206ENST00000556684 SPDYE6P0CI01 402 aa15.29■□□□□ 0.04
LINC01146-206ENST00000556684 SPDYE2Q495Y8 402 aa15.29■□□□□ 0.04
LINC01146-206ENST00000556684 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
LINC01146-206ENST00000556684 PITPNM1O00562 1244 aa15.27■□□□□ 0.04
LINC01146-206ENST00000556684 RB1CC1Q8TDY2 1594 aa15.26■□□□□ 0.03
LINC01146-206ENST00000556684 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
LINC01146-206ENST00000556684 NACADO15069 1562 aa15.17■□□□□ 0.02
LINC01146-206ENST00000556684 ZNF692Q9BU19 519 aaPredicted RBP15.14■□□□□ 0.01
LINC01146-206ENST00000556684 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
LINC01146-206ENST00000556684 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
LINC01146-206ENST00000556684 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
LINC01146-206ENST00000556684 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
LINC01146-206ENST00000556684 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
LINC01146-206ENST00000556684 MYO15BQ96JP2 1530 aa15.01□□□□□ -0.01
LINC01146-206ENST00000556684 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
LINC01146-206ENST00000556684 SP7Q8TDD2 431 aaPredicted RBP14.93□□□□□ -0.02
LINC01146-206ENST00000556684 HAX1O00165 279 aa14.92□□□□□ -0.02
LINC01146-206ENST00000556684 PRKAR2AP13861 404 aaKnown RBP14.88□□□□□ -0.03
LINC01146-206ENST00000556684 DCAF1Q9Y4B6 1507 aa14.8□□□□□ -0.04
LINC01146-206ENST00000556684 ZCCHC6Q5VYS8 1495 aaKnown RBP14.77□□□□□ -0.04
LINC01146-206ENST00000556684 PRR29P0C7W0 189 aa14.77□□□□□ -0.05
LINC01146-206ENST00000556684 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
LINC01146-206ENST00000556684 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
LINC01146-206ENST00000556684 EVX2Q03828 476 aa14.73□□□□□ -0.05
LINC01146-206ENST00000556684 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
LINC01146-206ENST00000556684 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
LINC01146-206ENST00000556684 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
LINC01146-206ENST00000556684 C19orf67A6NJJ6 358 aa14.61□□□□□ -0.07
LINC01146-206ENST00000556684 SCRIBQ14160 1630 aa14.52□□□□□ -0.08
LINC01146-206ENST00000556684 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
LINC01146-206ENST00000556684 STAG3Q9UJ98 1225 aa14.49□□□□□ -0.09
LINC01146-206ENST00000556684 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
LINC01146-206ENST00000556684 CD44P16070 742 aaKnown RBP14.42□□□□□ -0.1
LINC01146-206ENST00000556684 CREBZFQ9NS37 354 aa14.41□□□□□ -0.1
LINC01146-206ENST00000556684 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
LINC01146-206ENST00000556684 GABBR2O75899 941 aa14.4□□□□□ -0.1
LINC01146-206ENST00000556684 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
LINC01146-206ENST00000556684 PROM2Q8N271 834 aa14.25□□□□□ -0.13
LINC01146-206ENST00000556684 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
LINC01146-206ENST00000556684 ZNF579Q8NAF0 562 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms