Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AL590004.4-201ENST00000566733 7060 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AURKA-203ENST00000371356 2112 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 AC132219.2-201ENST00000624416 2327 ntBASIC8.22□□□□□ -1.09
SNED1Q8TER0 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SNED1Q8TER0 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNED1Q8TER0 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SNED1Q8TER0 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SNED1Q8TER0 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 IPO7P2-201ENST00000451446 1750 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC135721.2-201ENST00000464237 300 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC104966.1-201ENST00000467010 1464 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 RPL7AP23-201ENST00000482625 776 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 SNX18P25-201ENST00000510539 758 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SNED1Q8TER0 IGKV3D-25-201ENST00000519599 235 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 RACGAP1P-201ENST00000550663 1879 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AL365223.1-201ENST00000574864 1297 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC012146.2-201ENST00000576545 416 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC079949.2-201ENST00000617117 2933 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.21□□□□□ -1.09
SNED1Q8TER0 AC018692.2-201ENST00000624130 348 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 AL080317.3-201ENST00000607434 4315 ntBASIC8.21□□□□□ -1.09
SNED1Q8TER0 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 DHFR2-202ENST00000394221 4038 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
SNED1Q8TER0 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC8.21□□□□□ -1.1
SNED1Q8TER0 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.21□□□□□ -1.1
SNED1Q8TER0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNED1Q8TER0 AC005702.3-201ENST00000585345 1447 ntBASIC8.21□□□□□ -1.1
SNED1Q8TER0 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.21□□□□□ -1.1
SNED1Q8TER0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 YWHAZP4-201ENST00000392459 708 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 GCNT1P4-201ENST00000404096 329 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 DHFRP2-201ENST00000414224 547 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC092865.3-201ENST00000425390 1026 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC115283.1-201ENST00000427353 400 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AL121916.1-201ENST00000429405 308 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 SNRPBP1-201ENST00000443634 282 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 PPIAP20-201ENST00000449839 135 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 RPL3P13-201ENST00000550415 216 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 BX323046.1-201ENST00000610145 535 ntBASIC8.2□□□□□ -1.1
SNED1Q8TER0 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNED1Q8TER0 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC8.2□□□□□ -1.1
SNED1Q8TER0 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms