Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 AC004948.1-201ENST00000609858 672 ntBASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 AC127024.6-201ENST00000621598 424 ntBASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 SHQ1P1-201ENST00000437111 1544 ntBASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
COL22A1Q8NFW1 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 PRKG1-203ENST00000373980 6928 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 DPYSL2-201ENST00000311151 4603 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 CST12P-201ENST00000457644 362 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AC095052.1-201ENST00000509955 863 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 RNA5SP206-201ENST00000516703 121 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 RN7SL404P-201ENST00000582421 281 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 RN7SL475P-201ENST00000583379 298 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AL513548.2-201ENST00000602994 1207 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AL352984.2-201ENST00000611153 546 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 AC087392.3-202ENST00000358446 1754 ntBASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
COL22A1Q8NFW1 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 PCDH15-229ENST00000616114 5846 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 RNA5SP346-201ENST00000363541 121 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 RBBP4P4-201ENST00000398588 1289 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 RPL31-202ENST00000409000 641 ntTSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 GTF3AP1-201ENST00000416942 1004 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 DNAJC19P5-201ENST00000443295 316 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AC008410.1-201ENST00000483777 339 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 RNA5SP271-201ENST00000516700 88 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 PVT1-214ENST00000522875 922 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 TRIM51HP-202ENST00000530412 1823 ntBASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
COL22A1Q8NFW1 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.84□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms