Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.97□□□□□ -1.13
COL4A5P29400 AC027544.3-201ENST00000535082 757 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.97□□□□□ -1.13
COL4A5P29400 MIR6811-201ENST00000620409 58 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 LINC02495-203ENST00000636704 242 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
COL4A5P29400 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.97□□□□□ -1.13
COL4A5P29400 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
COL4A5P29400 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC7.97□□□□□ -1.13
COL4A5P29400 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.97□□□□□ -1.13
COL4A5P29400 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 AC091544.5-201ENST00000620192 3815 ntBASIC7.97□□□□□ -1.13
COL4A5P29400 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
COL4A5P29400 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.97□□□□□ -1.13
COL4A5P29400 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
COL4A5P29400 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC7.96□□□□□ -1.13
COL4A5P29400 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC7.96□□□□□ -1.13
COL4A5P29400 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL4A5P29400 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC7.96□□□□□ -1.13
COL4A5P29400 AL359092.1-201ENST00000417156 265 ntBASIC7.96□□□□□ -1.13
COL4A5P29400 ANKRD54P1-201ENST00000433115 471 ntBASIC7.96□□□□□ -1.13
COL4A5P29400 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.96□□□□□ -1.13
COL4A5P29400 AP002453.1-201ENST00000492327 668 ntBASIC7.96□□□□□ -1.13
COL4A5P29400 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
COL4A5P29400 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.96□□□□□ -1.13
COL4A5P29400 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
COL4A5P29400 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.96□□□□□ -1.13
COL4A5P29400 BAZ2A-214ENST00000551812 8600 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
COL4A5P29400 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
COL4A5P29400 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
COL4A5P29400 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL4A5P29400 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL4A5P29400 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
COL4A5P29400 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
COL4A5P29400 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL4A5P29400 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
COL4A5P29400 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC007998.1-201ENST00000474156 672 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AC055733.3-201ENST00000505214 523 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC073046.2-201ENST00000604756 527 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 AP000577.1-201ENST00000624366 878 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 XRCC6P4-201ENST00000518193 2067 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
COL4A5P29400 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.95□□□□□ -1.14
COL4A5P29400 RPS14P8-201ENST00000478778 369 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 RPL12P30-201ENST00000488389 499 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AC027308.1-201ENST00000517993 110 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AC090022.1-201ENST00000546569 311 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 NPM1P45-201ENST00000583151 559 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC018659.2-201ENST00000624690 715 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.95□□□□□ -1.14
COL4A5P29400 AC073488.2-201ENST00000631903 751 ntBASIC7.95□□□□□ -1.14
COL4A5P29400 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
COL4A5P29400 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC7.95□□□□□ -1.14
COL4A5P29400 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms