Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HTTP42858 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HTTP42858 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 RPS14P8-201ENST00000478778 369 ntBASIC7.16□□□□□ -1.26
HTTP42858 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 AC108693.1-201ENST00000496068 432 ntBASIC7.16□□□□□ -1.26
HTTP42858 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC7.16□□□□□ -1.26
HTTP42858 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.16□□□□□ -1.26
HTTP42858 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 AL356986.1-201ENST00000604085 341 ntBASIC7.16□□□□□ -1.26
HTTP42858 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 AC119674.1-201ENST00000641611 1210 ntBASIC7.16□□□□□ -1.26
HTTP42858 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HTTP42858 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.16□□□□□ -1.26
HTTP42858 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.16□□□□□ -1.26
HTTP42858 AC004808.2-201ENST00000627965 773 ntBASIC7.16□□□□□ -1.26
HTTP42858 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HTTP42858 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HTTP42858 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.15□□□□□ -1.26
HTTP42858 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC7.15□□□□□ -1.26
HTTP42858 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 MTND6P1-201ENST00000417434 424 ntBASIC7.15□□□□□ -1.26
HTTP42858 AC092017.2-201ENST00000427600 362 ntBASIC7.15□□□□□ -1.26
HTTP42858 IGLV3-4-201ENST00000432300 244 ntBASIC7.15□□□□□ -1.26
HTTP42858 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.15□□□□□ -1.26
HTTP42858 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.15□□□□□ -1.26
HTTP42858 AC106785.4-201ENST00000569492 412 ntBASIC7.15□□□□□ -1.26
HTTP42858 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.15□□□□□ -1.26
HTTP42858 AP005119.1-201ENST00000580956 292 ntBASIC7.15□□□□□ -1.26
HTTP42858 AC005332.4-201ENST00000592752 579 ntBASIC7.15□□□□□ -1.26
HTTP42858 AL589674.2-201ENST00000604304 337 ntBASIC7.15□□□□□ -1.26
HTTP42858 AC096708.4-201ENST00000620563 552 ntBASIC7.15□□□□□ -1.26
HTTP42858 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
HTTP42858 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
HTTP42858 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.15□□□□□ -1.26
HTTP42858 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 TMEM33-202ENST00000325094 6221 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
HTTP42858 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.15□□□□□ -1.26
HTTP42858 TRIM51HP-202ENST00000530412 1823 ntBASIC7.15□□□□□ -1.27
HTTP42858 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
HTTP42858 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.15□□□□□ -1.27
HTTP42858 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.15□□□□□ -1.27
HTTP42858 RPL21P133-201ENST00000443666 476 ntBASIC7.15□□□□□ -1.27
HTTP42858 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.15□□□□□ -1.27
HTTP42858 DPPA2P4-201ENST00000563717 878 ntBASIC7.15□□□□□ -1.27
HTTP42858 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC7.15□□□□□ -1.27
HTTP42858 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 AL445670.1-201ENST00000618889 801 ntBASIC7.15□□□□□ -1.27
HTTP42858 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.15□□□□□ -1.27
HTTP42858 ABCA8-201ENST00000269080 5677 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.15□□□□□ -1.27
HTTP42858 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 PTGS1-202ENST00000362012 4964 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC7.15□□□□□ -1.27
HTTP42858 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
HTTP42858 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
HTTP42858 AL590763.1-201ENST00000398297 1545 ntBASIC7.15□□□□□ -1.27
HTTP42858 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.15□□□□□ -1.27
HTTP42858 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC7.14□□□□□ -1.27
HTTP42858 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.14□□□□□ -1.27
HTTP42858 SNORA74A-201ENST00000364089 198 ntBASIC7.14□□□□□ -1.27
HTTP42858 RNA5SP132-201ENST00000364725 118 ntBASIC7.14□□□□□ -1.27
HTTP42858 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
HTTP42858 SNORA70-201ENST00000384436 135 ntBASIC7.14□□□□□ -1.27
HTTP42858 AP000534.2-201ENST00000412729 568 ntBASIC7.14□□□□□ -1.27
HTTP42858 RPL36AP39-201ENST00000445859 318 ntBASIC7.14□□□□□ -1.27
HTTP42858 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.14□□□□□ -1.27
HTTP42858 RPA2P1-201ENST00000556557 721 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms