Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
HMGB1P09429 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC8.59□□□□□ -1.03
HMGB1P09429 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.59□□□□□ -1.03
HMGB1P09429 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.59□□□□□ -1.03
HMGB1P09429 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.04
HMGB1P09429 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.58□□□□□ -1.04
HMGB1P09429 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC8.58□□□□□ -1.04
HMGB1P09429 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 AC061975.5-201ENST00000584928 1441 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 AC010132.2-201ENST00000295493 1043 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 RPL7P58-201ENST00000402913 758 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 SUMO2P13-201ENST00000403109 272 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 REREP1Y-201ENST00000422655 198 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 OR7E117P-201ENST00000422682 1112 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 FTLP19-201ENST00000433300 394 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 REREP2Y-201ENST00000439103 200 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 RSL24D1P2-201ENST00000445584 366 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 OR13C1P-201ENST00000457612 963 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 HMMR-AS1-201ENST00000514724 697 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 AC117525.1-201ENST00000515228 503 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 SNORA48.9-201ENST00000516419 162 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 BMPR1APS2-201ENST00000527904 1012 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 AC023310.2-201ENST00000553844 547 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.58□□□□□ -1.04
HMGB1P09429 UBE2CP4-201ENST00000561405 535 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 AL023806.2-201ENST00000603042 263 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC023513.1-201ENST00000604396 691 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HMGB1P09429 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 MIR8089-201ENST00000620165 82 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AP000842.4-201ENST00000638781 748 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 AL157713.1-201ENST00000379752 1531 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
HMGB1P09429 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.58□□□□□ -1.04
HMGB1P09429 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 SAMM50P1-201ENST00000455403 1399 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.58□□□□□ -1.04
HMGB1P09429 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
HMGB1P09429 CDY7P-201ENST00000429883 1604 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 AC090771.1-201ENST00000585803 1618 ntBASIC8.58□□□□□ -1.04
HMGB1P09429 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.58□□□□□ -1.04
HMGB1P09429 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 AP003119.3-201ENST00000566747 4192 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 EEF1A1P28-201ENST00000450915 1403 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 AC017104.2-201ENST00000417000 321 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 TAS2R2P-201ENST00000421146 910 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 AC093107.1-201ENST00000422772 609 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 GSTA6P-201ENST00000424144 582 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 DEFA11P-201ENST00000446470 261 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 RN7SL688P-201ENST00000471754 275 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC8.57□□□□□ -1.04
HMGB1P09429 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 AC112225.1-201ENST00000508230 297 ntBASIC8.57□□□□□ -1.04
HMGB1P09429 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC8.57□□□□□ -1.04
HMGB1P09429 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC8.57□□□□□ -1.04
HMGB1P09429 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC8.57□□□□□ -1.04
HMGB1P09429 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.57□□□□□ -1.04
HMGB1P09429 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC8.57□□□□□ -1.04
HMGB1P09429 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HMGB1P09429 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms