Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SPTA1P02549 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SPTA1P02549 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SPTA1P02549 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC6.38□□□□□ -1.39
SPTA1P02549 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SPTA1P02549 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.38□□□□□ -1.39
SPTA1P02549 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
SPTA1P02549 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 AC092279.2-201ENST00000623742 2189 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 THAP12P3-201ENST00000456373 2266 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SPTA1P02549 RNA5SP510-201ENST00000364697 99 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 RNA5SP279-201ENST00000365513 117 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC005040.1-201ENST00000437783 482 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 AC007919.2-201ENST00000444110 511 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 RPS26P11-201ENST00000463445 348 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 RPS26P6-201ENST00000475156 348 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC6.37□□□□□ -1.39
SPTA1P02549 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC004948.1-201ENST00000609858 672 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 MAPK10-285ENST00000641207 2746 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SPTA1P02549 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SPTA1P02549 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 IPPKP1-201ENST00000422501 768 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 RN7SL174P-201ENST00000475578 289 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 RPL32P3-203ENST00000506593 498 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 LINC00556-201ENST00000569603 412 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC063977.7-201ENST00000594454 337 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 AC069234.4-201ENST00000621276 412 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 MIR6719-201ENST00000622428 87 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 AL590396.3-201ENST00000636334 300 ntBASIC6.37□□□□□ -1.39
SPTA1P02549 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.37□□□□□ -1.39
SPTA1P02549 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPTA1P02549 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
SPTA1P02549 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SPTA1P02549 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC6.36□□□□□ -1.39
SPTA1P02549 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 PSORS1C1-201ENST00000259881 908 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 DNAJA1P5-201ENST00000440278 943 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.36□□□□□ -1.39
SPTA1P02549 AP005639.1-201ENST00000526939 192 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC6.36□□□□□ -1.39
SPTA1P02549 MIR6826-201ENST00000617808 98 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 AC138207.6-201ENST00000579164 1967 ntBASIC6.36□□□□□ -1.39
SPTA1P02549 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SPTA1P02549 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SPTA1P02549 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SPTA1P02549 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms