Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
DNMT3AQ9Y6K1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 PRKY-204ENST00000533551 1019 ntBASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
DNMT3AQ9Y6K1 AL512408.1-201ENST00000569378 2000 ntBASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 PRORSD1P-201ENST00000295112 541 ntBASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DNMT3AQ9Y6K1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
DNMT3AQ9Y6K1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DNMT3AQ9Y6K1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.51■□□□□ 0.71
DNMT3AQ9Y6K1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 AC073130.3-201ENST00000624389 2278 ntBASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
DNMT3AQ9Y6K1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 AC116351.2-201ENST00000606540 1585 ntBASIC19.49■□□□□ 0.71
DNMT3AQ9Y6K1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms