Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AC124283.5-201ENST00000624661 1809 ntBASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGC4Q9Y5F7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.14■□□□□ 0.82
PCDHGC4Q9Y5F7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGC4Q9Y5F7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGC4Q9Y5F7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 KRT16P6-202ENST00000425692 1426 ntBASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGC4Q9Y5F7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 FAM201B-201ENST00000458407 597 ntBASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHGC4Q9Y5F7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 RPS2P52-201ENST00000469610 820 ntBASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHGC4Q9Y5F7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 AL691432.2-201ENST00000607222 2038 ntBASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 ABHD17AP1-201ENST00000358206 933 ntBASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 AC006058.3-201ENST00000606217 1069 ntBASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHGC4Q9Y5F7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms