Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LSM5Q9Y4Y9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LSM5Q9Y4Y9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.43■□□□□ 0.22
LSM5Q9Y4Y9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LSM5Q9Y4Y9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 AC011298.3-201ENST00000615796 283 ntBASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LSM5Q9Y4Y9 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 DUX4L19-201ENST00000557448 1267 ntBASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 MIR3621-201ENST00000580529 85 ntBASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 AC007613.1-201ENST00000572811 2597 ntBASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LSM5Q9Y4Y9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LSM5Q9Y4Y9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 AC005082.1-201ENST00000413042 2259 ntBASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LSM5Q9Y4Y9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms