Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 SLC29A4P1-201ENST00000398760 971 ntBASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 AC083906.2-201ENST00000511578 360 ntBASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.82■□□□□ 0.76
VPS9D1Q9Y2B5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VPS9D1Q9Y2B5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VPS9D1Q9Y2B5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 AP001271.2-201ENST00000624018 1556 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 GPX1P1-201ENST00000388829 606 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 MIPEPP3-201ENST00000412105 444 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 AC092118.2-201ENST00000613495 667 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 PCDHAC2-203ENST00000615316 3011 ntBASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.79■□□□□ 0.76
VPS9D1Q9Y2B5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 AC009237.14-201ENST00000609975 1594 ntBASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 NCF1B-203ENST00000435988 1254 ntBASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
VPS9D1Q9Y2B5 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms