Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF6Q9Y252 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF6Q9Y252 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 POU5F1P4-201ENST00000413175 1085 ntBASIC18.72■□□□□ 0.59
RNF6Q9Y252 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 AC092118.2-201ENST00000613495 667 ntBASIC18.72■□□□□ 0.59
RNF6Q9Y252 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF6Q9Y252 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF6Q9Y252 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF6Q9Y252 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF6Q9Y252 AC011484.1-201ENST00000377652 1995 ntBASIC18.72■□□□□ 0.59
RNF6Q9Y252 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 AC098818.2-201ENST00000564925 2320 ntBASIC18.71■□□□□ 0.59
RNF6Q9Y252 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 BX276092.2-201ENST00000417668 665 ntBASIC18.71■□□□□ 0.59
RNF6Q9Y252 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 AC008687.6-201ENST00000596318 630 ntBASIC18.71■□□□□ 0.59
RNF6Q9Y252 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF6Q9Y252 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF6Q9Y252 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
RNF6Q9Y252 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF6Q9Y252 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF6Q9Y252 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF6Q9Y252 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF6Q9Y252 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF6Q9Y252 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF6Q9Y252 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 AC125437.2-201ENST00000625180 2167 ntBASIC18.69■□□□□ 0.58
RNF6Q9Y252 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 KRT18P29-201ENST00000397031 1267 ntBASIC18.69■□□□□ 0.58
RNF6Q9Y252 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 ITM2C-210ENST00000620962 501 ntBASIC18.69■□□□□ 0.58
RNF6Q9Y252 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 AC092720.2-201ENST00000602388 1665 ntBASIC18.69■□□□□ 0.58
RNF6Q9Y252 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF6Q9Y252 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF6Q9Y252 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RNF6Q9Y252 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RNF6Q9Y252 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms