Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 AC011270.2-201ENST00000624293 2550 ntBASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RPH3ALQ9UNE2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RPH3ALQ9UNE2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 AC018445.3-201ENST00000624177 1945 ntBASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RPH3ALQ9UNE2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 AC098818.2-201ENST00000564925 2320 ntBASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RPH3ALQ9UNE2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 AL136162.1-201ENST00000607711 1078 ntBASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.5■□□□□ 0.07
RPH3ALQ9UNE2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RPH3ALQ9UNE2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms