Protein–RNA interactions for Protein: Q9UMS4

PRPF19, Pre-mRNA-processing factor 19, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19Q9UMS4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19■□□□□ 0.63
PRPF19Q9UMS4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19■□□□□ 0.63
PRPF19Q9UMS4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 FAM21FP-204ENST00000608637 956 ntBASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 CROCCP3-202ENST00000420820 1947 ntBASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.99■□□□□ 0.63
PRPF19Q9UMS4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 AC138907.5-202ENST00000569484 235 ntBASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.98■□□□□ 0.63
PRPF19Q9UMS4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PRPF19Q9UMS4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 AL049812.1-201ENST00000432563 2267 ntBASIC18.96■□□□□ 0.63
PRPF19Q9UMS4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms