Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NLGN3Q9NZ94 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 AC121338.2-201ENST00000622535 1744 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 SLC25A24-204ENST00000569674 2357 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 HLA-G-202ENST00000376815 851 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 HLA-G-203ENST00000376818 1127 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 AL355355.2-201ENST00000442321 338 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 AC004264.1-201ENST00000608354 794 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 AL049796.1-201ENST00000565336 1766 ntBASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NLGN3Q9NZ94 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 AP003071.4-201ENST00000562276 1284 ntBASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 CD177P1-201ENST00000606252 935 ntBASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 AC097493.4-201ENST00000641197 219 ntBASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.53■□□□□ 0.72
NLGN3Q9NZ94 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 KRT18P21-201ENST00000515767 1272 ntBASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NLGN3Q9NZ94 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NLGN3Q9NZ94 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
NLGN3Q9NZ94 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 AC012306.2-201ENST00000609350 630 ntBASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NLGN3Q9NZ94 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.5■□□□□ 0.71
NLGN3Q9NZ94 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms