Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDE1Q9NXR1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 KRT8P36-201ENST00000489121 1440 ntBASIC19.24■□□□□ 0.67
NDE1Q9NXR1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.24■□□□□ 0.67
NDE1Q9NXR1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDE1Q9NXR1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 AL049812.1-201ENST00000432563 2267 ntBASIC19.23■□□□□ 0.67
NDE1Q9NXR1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDE1Q9NXR1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 AC120498.10-201ENST00000621827 505 ntBASIC19.22■□□□□ 0.67
NDE1Q9NXR1 AL138781.2-201ENST00000617896 1843 ntBASIC19.22■□□□□ 0.67
NDE1Q9NXR1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDE1Q9NXR1 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.22■□□□□ 0.67
NDE1Q9NXR1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.21■□□□□ 0.67
NDE1Q9NXR1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms