Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC3Q9NUV7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SPTLC3Q9NUV7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AC245052.3-201ENST00000450182 901 ntBASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AC138907.5-202ENST00000569484 235 ntBASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AL358852.1-201ENST00000623174 1268 ntBASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SPTLC3Q9NUV7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 LTB4R2-202ENST00000528054 3092 ntBASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 AL032819.2-201ENST00000624543 2162 ntBASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SPTLC3Q9NUV7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 KRT16P2-201ENST00000414673 1423 ntBASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 BX119927.1-201ENST00000636596 1552 ntBASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SPTLC3Q9NUV7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 AC009113.1-201ENST00000570267 2443 ntBASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.89■■□□□ 1.1
SPTLC3Q9NUV7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 AL390961.4-201ENST00000623958 2535 ntBASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 PCDHB18P-201ENST00000524813 2368 ntBASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SPTLC3Q9NUV7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms