Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 AC007322.3-201ENST00000426526 701 ntBASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 TMEM179-206ENST00000616017 1645 ntBASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
LIN7CQ9NUP9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 DUX4L16-201ENST00000555130 1264 ntBASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.53■□□□□ 0.24
LIN7CQ9NUP9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 AC116562.4-201ENST00000641316 2276 ntBASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 AC007322.4-201ENST00000509611 723 ntBASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 AC073111.5-205ENST00000641717 521 ntBASIC16.52■□□□□ 0.24
LIN7CQ9NUP9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LIN7CQ9NUP9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 AC007322.1-201ENST00000426983 750 ntBASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 BX119927.1-201ENST00000636596 1552 ntBASIC16.51■□□□□ 0.23
LIN7CQ9NUP9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 PGM5P4-201ENST00000421970 445 ntBASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 AC026185.1-201ENST00000445748 174 ntBASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
LIN7CQ9NUP9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms