Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.24■■□□□ 1.31
EFCC1Q9HA90 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 AC233723.2-201ENST00000623798 2106 ntBASIC23.23■■□□□ 1.31
EFCC1Q9HA90 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 AP002982.1-201ENST00000492365 877 ntBASIC23.23■■□□□ 1.31
EFCC1Q9HA90 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
EFCC1Q9HA90 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 F2R-202ENST00000505600 442 ntTSL 2 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 AC073130.3-201ENST00000624389 2278 ntBASIC23.22■■□□□ 1.31
EFCC1Q9HA90 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.22■■□□□ 1.31
EFCC1Q9HA90 AC124283.5-201ENST00000624661 1809 ntBASIC23.22■■□□□ 1.31
EFCC1Q9HA90 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 UPK3BP1-201ENST00000428678 509 ntBASIC23.21■■□□□ 1.31
EFCC1Q9HA90 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.21■■□□□ 1.31
EFCC1Q9HA90 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.2■■□□□ 1.31
EFCC1Q9HA90 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 TPM4P1-201ENST00000436100 807 ntBASIC23.2■■□□□ 1.3
EFCC1Q9HA90 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 AL137060.1-201ENST00000618151 2648 ntBASIC23.2■■□□□ 1.3
EFCC1Q9HA90 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
EFCC1Q9HA90 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.19■■□□□ 1.3
EFCC1Q9HA90 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.18■■□□□ 1.3
EFCC1Q9HA90 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms