Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 MIR4767-201ENST00000582827 78 ntBASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 AC233992.3-201ENST00000607491 485 ntBASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.73■■□□□ 1.07
KCNF1Q9H3M0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 KRT16P2-201ENST00000414673 1423 ntBASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 AC126544.1-201ENST00000580842 1059 ntBASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
KCNF1Q9H3M0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNF1Q9H3M0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
KCNF1Q9H3M0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 AC006333.2-201ENST00000607957 2099 ntBASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 AL161938.1-201ENST00000569833 2180 ntBASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNF1Q9H3M0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNF1Q9H3M0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNF1Q9H3M0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNF1Q9H3M0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNF1Q9H3M0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNF1Q9H3M0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms