Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 YBX1P10-201ENST00000444752 975 ntBASIC26■■□□□ 1.75
PCDH11XQ9BZA7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 DUX4L26-201ENST00000489078 1255 ntBASIC26■■□□□ 1.75
PCDH11XQ9BZA7 GRAMD4P8-201ENST00000605465 1115 ntBASIC26■■□□□ 1.75
PCDH11XQ9BZA7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 AC005229.4-201ENST00000610085 2198 ntBASIC26■■□□□ 1.75
PCDH11XQ9BZA7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC26■■□□□ 1.75
PCDH11XQ9BZA7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 AC010203.1-204ENST00000548782 407 ntBASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 C2orf69P3-201ENST00000565542 1120 ntBASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC25.99■■□□□ 1.75
PCDH11XQ9BZA7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDH11XQ9BZA7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 FEM1AP4-201ENST00000443167 1987 ntBASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
PCDH11XQ9BZA7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 TFP1-202ENST00000475455 1573 ntBASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 AC004980.1-204ENST00000429707 299 ntBASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 KRT18P16-201ENST00000510337 1294 ntBASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDH11XQ9BZA7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 TSPY14P-201ENST00000303979 915 ntBASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 AC104076.2-201ENST00000448912 469 ntBASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC25.95■■□□□ 1.75
PCDH11XQ9BZA7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 DPP3P2-201ENST00000416030 1696 ntBASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDH11XQ9BZA7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 EGLN1P1-201ENST00000531623 762 ntBASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 AC006011.2-201ENST00000621313 1158 ntBASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDH11XQ9BZA7 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms