Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 GPX1P1-201ENST00000388829 606 ntBASIC19.46■□□□□ 0.71
NPAS2Q99743 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.46■□□□□ 0.71
NPAS2Q99743 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.46■□□□□ 0.71
NPAS2Q99743 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NPAS2Q99743 GUSBP6-202ENST00000438529 1198 ntBASIC19.46■□□□□ 0.71
NPAS2Q99743 AC008175.2-201ENST00000612840 297 ntBASIC19.46■□□□□ 0.71
NPAS2Q99743 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 MIR2861-201ENST00000636310 90 ntBASIC19.46■□□□□ 0.71
NPAS2Q99743 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NPAS2Q99743 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NPAS2Q99743 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NPAS2Q99743 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
NPAS2Q99743 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS2Q99743 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 AC083906.2-201ENST00000511578 360 ntBASIC19.45■□□□□ 0.7
NPAS2Q99743 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.45■□□□□ 0.7
NPAS2Q99743 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NPAS2Q99743 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPAS2Q99743 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.45■□□□□ 0.7
NPAS2Q99743 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NPAS2Q99743 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
NPAS2Q99743 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NPAS2Q99743 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NPAS2Q99743 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS2Q99743 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 POU5F1P4-201ENST00000413175 1085 ntBASIC19.44■□□□□ 0.7
NPAS2Q99743 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 AL121832.2-201ENST00000610979 668 ntBASIC19.44■□□□□ 0.7
NPAS2Q99743 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NPAS2Q99743 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.44■□□□□ 0.7
NPAS2Q99743 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NPAS2Q99743 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NPAS2Q99743 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NPAS2Q99743 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.43■□□□□ 0.7
NPAS2Q99743 AL355802.2-201ENST00000402069 882 ntBASIC19.43■□□□□ 0.7
NPAS2Q99743 AC013268.1-206ENST00000638368 961 ntBASIC19.43■□□□□ 0.7
NPAS2Q99743 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.43■□□□□ 0.7
NPAS2Q99743 AC112229.1-201ENST00000639295 961 ntBASIC19.43■□□□□ 0.7
NPAS2Q99743 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.43■□□□□ 0.7
NPAS2Q99743 AC004408.2-201ENST00000623613 2777 ntBASIC19.43■□□□□ 0.7
NPAS2Q99743 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NPAS2Q99743 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 AC068338.2-201ENST00000563278 1430 ntBASIC19.42■□□□□ 0.7
NPAS2Q99743 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NPAS2Q99743 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NPAS2Q99743 TSPY6P-201ENST00000448518 926 ntBASIC19.42■□□□□ 0.7
NPAS2Q99743 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.42■□□□□ 0.7
NPAS2Q99743 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms