Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 MIR2861-201ENST00000636310 90 ntBASIC15.82■□□□□ 0.12
RNF2Q99496 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RNF2Q99496 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 KRT16P2-201ENST00000414673 1423 ntBASIC15.82■□□□□ 0.12
RNF2Q99496 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.82■□□□□ 0.12
RNF2Q99496 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RNF2Q99496 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
RNF2Q99496 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RNF2Q99496 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RNF2Q99496 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
RNF2Q99496 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.81■□□□□ 0.12
RNF2Q99496 AL162430.1-201ENST00000480705 870 ntBASIC15.81■□□□□ 0.12
RNF2Q99496 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.81■□□□□ 0.12
RNF2Q99496 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.81■□□□□ 0.12
RNF2Q99496 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 KRT18P20-201ENST00000548986 1279 ntBASIC15.81■□□□□ 0.12
RNF2Q99496 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 TMEM179-206ENST00000616017 1645 ntBASIC15.81■□□□□ 0.12
RNF2Q99496 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RNF2Q99496 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF2Q99496 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF2Q99496 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF2Q99496 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF2Q99496 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
RNF2Q99496 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF2Q99496 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF2Q99496 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF2Q99496 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF2Q99496 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RNF2Q99496 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 AC116562.4-201ENST00000641316 2276 ntBASIC15.79■□□□□ 0.12
RNF2Q99496 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
RNF2Q99496 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF2Q99496 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF2Q99496 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RNF2Q99496 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms