Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SLC46A1Q96NT5 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC46A1Q96NT5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC46A1Q96NT5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC46A1Q96NT5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SLC46A1Q96NT5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 UNC93B2-201ENST00000285383 730 ntBASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 RBM17P1-201ENST00000453646 1190 ntBASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 NUDT16P1-203ENST00000513809 620 ntBASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 PLK5-205ENST00000642079 1969 ntBASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SLC46A1Q96NT5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 AC124283.5-201ENST00000624661 1809 ntBASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 AC079598.2-202ENST00000546624 1451 ntBASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SLC46A1Q96NT5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC46A1Q96NT5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC46A1Q96NT5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 AC004264.1-201ENST00000608354 794 ntBASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 REXO1L10P-201ENST00000615707 1290 ntBASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 AC006128.1-201ENST00000624704 1661 ntBASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC46A1Q96NT5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 AC005521.1-201ENST00000393351 872 ntBASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 AL121906.2-201ENST00000621597 723 ntBASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC46A1Q96NT5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms