Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 MIR4767-201ENST00000582827 78 ntBASIC17.13■□□□□ 0.33
CMTM3Q96MX0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 AL358852.1-201ENST00000623174 1268 ntBASIC17.13■□□□□ 0.33
CMTM3Q96MX0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.13■□□□□ 0.33
CMTM3Q96MX0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CMTM3Q96MX0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 AP001271.2-201ENST00000624018 1556 ntBASIC17.11■□□□□ 0.33
CMTM3Q96MX0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.11■□□□□ 0.33
CMTM3Q96MX0 AC007322.3-201ENST00000426526 701 ntBASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.11■□□□□ 0.33
CMTM3Q96MX0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.11■□□□□ 0.33
CMTM3Q96MX0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CMTM3Q96MX0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms