Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC138Q96M89 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 KRT17P1-201ENST00000399211 1546 ntBASIC19.66■□□□□ 0.74
CCDC138Q96M89 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC138Q96M89 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 LSM12P1-201ENST00000411836 588 ntBASIC19.65■□□□□ 0.74
CCDC138Q96M89 NCF1B-203ENST00000435988 1254 ntBASIC19.65■□□□□ 0.74
CCDC138Q96M89 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.65■□□□□ 0.74
CCDC138Q96M89 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC138Q96M89 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCDC138Q96M89 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC138Q96M89 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC138Q96M89 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC138Q96M89 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.74
CCDC138Q96M89 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC138Q96M89 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.64■□□□□ 0.73
CCDC138Q96M89 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 SMG8-203ENST00000578922 2178 ntBASIC19.64■□□□□ 0.73
CCDC138Q96M89 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC138Q96M89 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC138Q96M89 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.63■□□□□ 0.73
CCDC138Q96M89 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.63■□□□□ 0.73
CCDC138Q96M89 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CCDC138Q96M89 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC138Q96M89 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC138Q96M89 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC138Q96M89 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 GPX1P1-201ENST00000388829 606 ntBASIC19.62■□□□□ 0.73
CCDC138Q96M89 BX276092.2-201ENST00000417668 665 ntBASIC19.62■□□□□ 0.73
CCDC138Q96M89 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC138Q96M89 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC138Q96M89 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC138Q96M89 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC138Q96M89 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms