Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 KRT8P20-201ENST00000423953 1409 ntBASIC17.98■□□□□ 0.47
SNRNP40Q96DI7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 EP400NL-214ENST00000641289 2402 ntBASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 LIN28AP1-201ENST00000429574 405 ntBASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SNRNP40Q96DI7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SNRNP40Q96DI7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SNRNP40Q96DI7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 WWOX-216ENST00000569818 525 ntBASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SNRNP40Q96DI7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 AC244015.2-201ENST00000616358 1861 ntBASIC17.94■□□□□ 0.46
SNRNP40Q96DI7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms