Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 AC097381.1-201ENST00000429019 1296 ntBASIC18.94■□□□□ 0.62
LRRC58Q96CX6 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRRC58Q96CX6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 AC087633.2-202ENST00000565166 1439 ntBASIC18.93■□□□□ 0.62
LRRC58Q96CX6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRC58Q96CX6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 AL032819.2-201ENST00000624543 2162 ntBASIC18.92■□□□□ 0.62
LRRC58Q96CX6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRC58Q96CX6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AC142381.2-201ENST00000566120 298 ntBASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRC58Q96CX6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms