Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VPS33AQ96AX1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VPS33AQ96AX1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 KRT18P61-201ENST00000585825 1298 ntBASIC19.1■□□□□ 0.65
VPS33AQ96AX1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 AC138932.1-201ENST00000534164 6830 ntBASIC19.1■□□□□ 0.65
VPS33AQ96AX1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
VPS33AQ96AX1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 UBE2DNL-204ENST00000602536 740 ntBASIC19.09■□□□□ 0.65
VPS33AQ96AX1 AL356652.1-201ENST00000615962 565 ntBASIC19.09■□□□□ 0.65
VPS33AQ96AX1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VPS33AQ96AX1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VPS33AQ96AX1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VPS33AQ96AX1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms