Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.6■□□□□ 0.41
RFT1Q96AA3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RFT1Q96AA3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 LINC02228-203ENST00000641970 1355 ntBASIC17.59■□□□□ 0.41
RFT1Q96AA3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 AC010141.2-201ENST00000452426 721 ntBASIC17.59■□□□□ 0.41
RFT1Q96AA3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.59■□□□□ 0.41
RFT1Q96AA3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RFT1Q96AA3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.58■□□□□ 0.41
RFT1Q96AA3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFT1Q96AA3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.58■□□□□ 0.41
RFT1Q96AA3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFT1Q96AA3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.58■□□□□ 0.41
RFT1Q96AA3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RFT1Q96AA3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RFT1Q96AA3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RFT1Q96AA3 KRT16P2-201ENST00000414673 1423 ntBASIC17.58■□□□□ 0.41
RFT1Q96AA3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.58■□□□□ 0.41
RFT1Q96AA3 AC093503.3-201ENST00000624917 2352 ntBASIC17.58■□□□□ 0.41
RFT1Q96AA3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFT1Q96AA3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFT1Q96AA3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 MIR638-201ENST00000385237 100 ntBASIC17.58■□□□□ 0.4
RFT1Q96AA3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RFT1Q96AA3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFT1Q96AA3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RFT1Q96AA3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.58■□□□□ 0.4
RFT1Q96AA3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFT1Q96AA3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.57■□□□□ 0.4
RFT1Q96AA3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFT1Q96AA3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L2-201ENST00000561772 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 AP001160.3-201ENST00000601484 763 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L6-201ENST00000626483 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L1-201ENST00000627662 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L8-201ENST00000629013 1275 ntBASIC17.56■□□□□ 0.4
RFT1Q96AA3 DUX4L3-201ENST00000630187 1275 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms