Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TMEM54Q969K7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TMEM54Q969K7 AC009237.14-201ENST00000609975 1594 ntBASIC17.58■□□□□ 0.41
TMEM54Q969K7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM54Q969K7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.58■□□□□ 0.41
TMEM54Q969K7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM54Q969K7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM54Q969K7 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 PNMA6B-201ENST00000538162 1200 ntBASIC17.58■□□□□ 0.4
TMEM54Q969K7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 AC006557.6-201ENST00000623071 864 ntBASIC17.58■□□□□ 0.4
TMEM54Q969K7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM54Q969K7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.58■□□□□ 0.4
TMEM54Q969K7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM54Q969K7 SLC25A24-204ENST00000569674 2357 ntBASIC17.58■□□□□ 0.4
TMEM54Q969K7 PHGDH-210ENST00000641115 1638 ntBASIC17.58■□□□□ 0.4
TMEM54Q969K7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.57■□□□□ 0.4
TMEM54Q969K7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM54Q969K7 AP001271.2-201ENST00000624018 1556 ntBASIC17.57■□□□□ 0.4
TMEM54Q969K7 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
TMEM54Q969K7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM54Q969K7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM54Q969K7 PCDHAC2-203ENST00000615316 3011 ntBASIC17.56■□□□□ 0.4
TMEM54Q969K7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TMEM54Q969K7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM54Q969K7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms