Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LINC00265-3P-201ENST00000447588 903 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 FGF14-AS2-201ENST00000606448 1074 ntBASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC8.18□□□□□ -1.1
SYNE2Q8WXH0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AL645939.2-201ENST00000427340 991 ntBASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 MIR4745-201ENST00000577608 62 ntBASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 METTL21AP1-201ENST00000438852 635 ntBASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC8.17□□□□□ -1.1
SYNE2Q8WXH0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MED22-202ENST00000371999 987 ntTSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 BX276092.5-203ENST00000456199 560 ntBASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 RPL13AP23-201ENST00000480739 586 ntBASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 BMF-207ENST00000559701 630 ntTSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 AC010653.2-201ENST00000623505 997 ntBASIC8.16□□□□□ -1.1
SYNE2Q8WXH0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms