Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 AC120498.9-201ENST00000339021 3867 ntBASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 AC116050.2-201ENST00000612102 1779 ntBASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RTN4IP1Q8WWV3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 AC010536.3-201ENST00000620306 533 ntBASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 TMEM179-206ENST00000616017 1645 ntBASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RTN4IP1Q8WWV3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 AC091799.1-201ENST00000422823 811 ntBASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.72■□□□□ 0.27
RTN4IP1Q8WWV3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 TNXA-203ENST00000507684 2038 ntBASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 AC005332.7-201ENST00000614046 2005 ntBASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 AC006015.1-201ENST00000429970 570 ntBASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.71■□□□□ 0.27
RTN4IP1Q8WWV3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms