Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 KRT17P2-201ENST00000300992 1314 ntBASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3RF2Q8TEC5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.71■□□□□ 0.91
SH3RF2Q8TEC5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 KRT16P5-201ENST00000455284 522 ntBASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SH3RF2Q8TEC5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 MIR4785-201ENST00000585005 73 ntBASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 HTR7P1-201ENST00000538670 1336 ntBASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 KRT8P17-201ENST00000453110 1448 ntBASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.69■□□□□ 0.9
SH3RF2Q8TEC5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3RF2Q8TEC5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms