Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4Y2Q8TD47 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AC087623.3-201ENST00000607047 1098 ntBASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 AC093503.3-201ENST00000624917 2352 ntBASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4Y2Q8TD47 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 AP001271.2-201ENST00000624018 1556 ntBASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 KRT8P17-201ENST00000453110 1448 ntBASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 AC034268.1-201ENST00000441047 882 ntBASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 AL032819.2-201ENST00000624543 2162 ntBASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4Y2Q8TD47 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RPS4Y2Q8TD47 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms