Protein–RNA interactions for Protein: Q8TBZ0

CCDC110, Coiled-coil domain-containing protein 110, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110Q8TBZ0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 AC004911.1-201ENST00000416316 871 ntBASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 AC007322.1-201ENST00000426983 750 ntBASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC110Q8TBZ0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC110Q8TBZ0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC110Q8TBZ0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CCDC110Q8TBZ0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CCDC110Q8TBZ0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC110Q8TBZ0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 AL355472.2-201ENST00000422958 438 ntBASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 AC069236.1-201ENST00000604339 616 ntBASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 IKBKGP1-201ENST00000612193 1073 ntBASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 AC092437.1-201ENST00000624794 1048 ntBASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC110Q8TBZ0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC110Q8TBZ0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 KRT18P68-201ENST00000392293 1000 ntBASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 AC105020.6-201ENST00000621523 1217 ntBASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 AC008694.1-202ENST00000636953 945 ntBASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC110Q8TBZ0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms