Protein–RNA interactions for Protein: Q8NG06

TRIM58, E3 ubiquitin-protein ligase TRIM58, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58Q8NG06 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 AC087633.2-202ENST00000565166 1439 ntBASIC21.16■□□□□ 0.98
TRIM58Q8NG06 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM58Q8NG06 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 AC019069.1-201ENST00000610008 1333 ntBASIC21.15■□□□□ 0.98
TRIM58Q8NG06 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM58Q8NG06 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM58Q8NG06 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 AC093503.3-201ENST00000624917 2352 ntBASIC21.14■□□□□ 0.97
TRIM58Q8NG06 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM58Q8NG06 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM58Q8NG06 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM58Q8NG06 AL032819.2-201ENST00000624543 2162 ntBASIC21.12■□□□□ 0.97
TRIM58Q8NG06 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TRIM58Q8NG06 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms