Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 AC044849.2-201ENST00000606596 710 ntBASIC10.96□□□□□ -0.65
SPTSSBQ8NFR3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
SPTSSBQ8NFR3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 OXCT2P1-201ENST00000447263 1535 ntBASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC10.95□□□□□ -0.66
SPTSSBQ8NFR3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SPTSSBQ8NFR3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 Z98882.1-201ENST00000622160 2253 ntBASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC10.93□□□□□ -0.66
SPTSSBQ8NFR3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms