Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SRFBP1Q8NEF9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SRFBP1Q8NEF9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 AL355802.2-201ENST00000402069 882 ntBASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SRFBP1Q8NEF9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRFBP1Q8NEF9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRFBP1Q8NEF9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SRFBP1Q8NEF9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 AC005829.2-201ENST00000571422 1056 ntBASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.01■□□□□ 0.63
SRFBP1Q8NEF9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 AC060766.5-201ENST00000590539 871 ntBASIC19■□□□□ 0.63
SRFBP1Q8NEF9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
SRFBP1Q8NEF9 GOLGA2P11-201ENST00000562660 1621 ntBASIC19■□□□□ 0.63
SRFBP1Q8NEF9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.99■□□□□ 0.63
SRFBP1Q8NEF9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SRFBP1Q8NEF9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms